Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Ccdc43Q9CR29 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Gm10052-201ENSMUST00000168019 960 ntBASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Gm7729-201ENSMUST00000050143 801 ntBASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Ccdc43Q9CR29 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Ccdc43Q9CR29 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Ccdc43Q9CR29 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Gm23634-201ENSMUST00000175071 91 ntBASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Gm36967-201ENSMUST00000193814 266 ntBASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Gm5587-201ENSMUST00000206270 674 ntBASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Ccdc43Q9CR29 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Ccdc43Q9CR29 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
Ccdc43Q9CR29 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Ccdc43Q9CR29 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms