Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Gm11780-201ENSMUST00000136880 516 ntBASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Gm7222-201ENSMUST00000117512 906 ntBASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lsm7Q9CQQ8 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm7Q9CQQ8 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm7Q9CQQ8 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm7Q9CQQ8 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm7Q9CQQ8 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lsm7Q9CQQ8 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.02■□□□□ 0.15
Lsm7Q9CQQ8 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Gm6257-201ENSMUST00000163864 910 ntBASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Gm18206-201ENSMUST00000207027 926 ntBASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lsm7Q9CQQ8 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gm3928-201ENSMUST00000121141 1307 ntBASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Mir5126-201ENSMUST00000175513 77 ntBASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gm6550-201ENSMUST00000187574 993 ntBASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lsm7Q9CQQ8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms