Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
H2afb1Q9CQ70 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
H2afb1Q9CQ70 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
H2afb1Q9CQ70 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Mir6404-201ENSMUST00000183699 94 ntBASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 AC125350.1-201ENSMUST00000225115 903 ntBASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
H2afb1Q9CQ70 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13□□□□□ -0.33
H2afb1Q9CQ70 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
H2afb1Q9CQ70 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms