Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ska1Q9CPV1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ska1Q9CPV1 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ska1Q9CPV1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ska1Q9CPV1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ska1Q9CPV1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.02■□□□□ -0
Ska1Q9CPV1 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ska1Q9CPV1 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ska1Q9CPV1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.02■□□□□ -0
Ska1Q9CPV1 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ska1Q9CPV1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ska1Q9CPV1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.02■□□□□ -0
Ska1Q9CPV1 Gm7370-201ENSMUST00000219471 767 ntBASIC15.02■□□□□ -0
Ska1Q9CPV1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ska1Q9CPV1 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Gm13436-201ENSMUST00000120418 567 ntBASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ska1Q9CPV1 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Ska1Q9CPV1 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Phf7-203ENSMUST00000226565 1971 ntBASIC15□□□□□ -0.01
Ska1Q9CPV1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Ska1Q9CPV1 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ska1Q9CPV1 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC15□□□□□ -0.01
Ska1Q9CPV1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC15□□□□□ -0.01
Ska1Q9CPV1 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15□□□□□ -0.01
Ska1Q9CPV1 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ska1Q9CPV1 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ska1Q9CPV1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15□□□□□ -0.01
Ska1Q9CPV1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ska1Q9CPV1 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms