Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim16Q99PP9 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trim16Q99PP9 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trim16Q99PP9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim16Q99PP9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Gm29518-201ENSMUST00000190858 372 ntBASIC15.57■□□□□ 0.08
Trim16Q99PP9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trim16Q99PP9 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.56■□□□□ 0.08
Trim16Q99PP9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trim16Q99PP9 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim16Q99PP9 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.55■□□□□ 0.08
Trim16Q99PP9 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Gm17808-201ENSMUST00000200859 894 ntBASIC15.55■□□□□ 0.08
Trim16Q99PP9 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Trim16Q99PP9 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trim16Q99PP9 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trim16Q99PP9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms