Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim33Q99PP7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim33Q99PP7 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.77■□□□□ 0.11
Trim33Q99PP7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim33Q99PP7 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim33Q99PP7 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim33Q99PP7 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim33Q99PP7 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.77■□□□□ 0.11
Trim33Q99PP7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim33Q99PP7 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim33Q99PP7 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.75■□□□□ 0.11
Trim33Q99PP7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim33Q99PP7 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim33Q99PP7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim33Q99PP7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms