Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Gm44454-201ENSMUST00000198541 138 ntBASIC16.17■□□□□ 0.18
Trem2Q99NH8 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.17■□□□□ 0.18
Trem2Q99NH8 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Trem2Q99NH8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.16■□□□□ 0.18
Trem2Q99NH8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.16■□□□□ 0.18
Trem2Q99NH8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trem2Q99NH8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.16■□□□□ 0.18
Trem2Q99NH8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.15■□□□□ 0.18
Trem2Q99NH8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.15■□□□□ 0.18
Trem2Q99NH8 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trem2Q99NH8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.18
Trem2Q99NH8 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trem2Q99NH8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trem2Q99NH8 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC16.14■□□□□ 0.17
Trem2Q99NH8 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.14■□□□□ 0.17
Trem2Q99NH8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Gm9172-201ENSMUST00000212092 954 ntBASIC16.14■□□□□ 0.17
Trem2Q99NH8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trem2Q99NH8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms