Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Gm13036-201ENSMUST00000117799 748 ntBASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sf3b1Q99NB9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sf3b1Q99NB9 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Gm11779-201ENSMUST00000118541 368 ntBASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Sf3b1Q99NB9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Gm14140-201ENSMUST00000119999 995 ntBASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Gm15467-201ENSMUST00000120582 445 ntBASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Sf3b1Q99NB9 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Gm11594-201ENSMUST00000122313 162 ntBASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Gm5264-201ENSMUST00000190584 848 ntBASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Gm2213-201ENSMUST00000197485 688 ntBASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Sf3b1Q99NB9 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms