Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Raf1Q99N57 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Raf1Q99N57 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.29□□□□□ -0.12
Raf1Q99N57 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Gm16061-201ENSMUST00000122167 857 ntBASIC14.29□□□□□ -0.12
Raf1Q99N57 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Raf1Q99N57 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Raf1Q99N57 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Raf1Q99N57 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.28□□□□□ -0.12
Raf1Q99N57 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Raf1Q99N57 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Raf1Q99N57 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Raf1Q99N57 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC14.28□□□□□ -0.12
Raf1Q99N57 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Raf1Q99N57 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Prob1-201ENSMUST00000097619 3021 ntBASIC14.28□□□□□ -0.12
Raf1Q99N57 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Raf1Q99N57 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Raf1Q99N57 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.28□□□□□ -0.12
Raf1Q99N57 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Raf1Q99N57 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.28□□□□□ -0.12
Raf1Q99N57 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.27□□□□□ -0.12
Raf1Q99N57 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Raf1Q99N57 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.27□□□□□ -0.12
Raf1Q99N57 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Raf1Q99N57 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.27□□□□□ -0.13
Raf1Q99N57 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Raf1Q99N57 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.27□□□□□ -0.13
Raf1Q99N57 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Raf1Q99N57 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raf1Q99N57 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raf1Q99N57 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
Raf1Q99N57 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raf1Q99N57 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raf1Q99N57 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raf1Q99N57 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raf1Q99N57 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Raf1Q99N57 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms