Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col25a1Q99MQ5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Gm27989-201ENSMUST00000184721 107 ntBASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Gm18062-201ENSMUST00000208020 547 ntBASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Gm18055-201ENSMUST00000208254 547 ntBASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col25a1Q99MQ5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Gm5682-201ENSMUST00000173402 505 ntBASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Gm27618-201ENSMUST00000183671 60 ntBASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Gm7774-201ENSMUST00000200064 533 ntBASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Gm43125-201ENSMUST00000201724 730 ntBASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Col25a1Q99MQ5 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Col25a1Q99MQ5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Col25a1Q99MQ5 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Col25a1Q99MQ5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Col25a1Q99MQ5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.39■□□□□ 0.21
Col25a1Q99MQ5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms