Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Gm6550-201ENSMUST00000187574 993 ntBASIC13.92□□□□□ -0.18
Scrt1Q99M85 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.92□□□□□ -0.18
Scrt1Q99M85 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.92□□□□□ -0.18
Scrt1Q99M85 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.91□□□□□ -0.18
Scrt1Q99M85 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 AV026068-213ENSMUST00000223675 1171 ntBASIC13.91□□□□□ -0.18
Scrt1Q99M85 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.91□□□□□ -0.18
Scrt1Q99M85 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.91□□□□□ -0.18
Scrt1Q99M85 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.91□□□□□ -0.18
Scrt1Q99M85 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Gm5648-201ENSMUST00000122244 1587 ntBASIC13.91□□□□□ -0.18
Scrt1Q99M85 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Scrt1Q99M85 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Gm13036-201ENSMUST00000117799 748 ntBASIC13.9□□□□□ -0.18
Scrt1Q99M85 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Gm26308-201ENSMUST00000157768 69 ntBASIC13.9□□□□□ -0.18
Scrt1Q99M85 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.9□□□□□ -0.18
Scrt1Q99M85 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Scrt1Q99M85 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Scrt1Q99M85 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Scrt1Q99M85 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.89□□□□□ -0.19
Scrt1Q99M85 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Scrt1Q99M85 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms