Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Rfc4Q99J62 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfc4Q99J62 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rfc4Q99J62 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.24■□□□□ 0.51
Rfc4Q99J62 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rfc4Q99J62 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Gm11185-201ENSMUST00000117732 1007 ntBASIC18.23■□□□□ 0.51
Rfc4Q99J62 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Gm7787-201ENSMUST00000216858 688 ntBASIC18.23■□□□□ 0.51
Rfc4Q99J62 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.23■□□□□ 0.51
Rfc4Q99J62 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rfc4Q99J62 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Gm15358-201ENSMUST00000119249 520 ntBASIC18.22■□□□□ 0.51
Rfc4Q99J62 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.22■□□□□ 0.51
Rfc4Q99J62 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rfc4Q99J62 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms