Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Gm15467-201ENSMUST00000120582 445 ntBASIC18.73■□□□□ 0.59
Col20a1Q923P0 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Gm42670-201ENSMUST00000201816 1292 ntBASIC18.73■□□□□ 0.59
Col20a1Q923P0 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Col20a1Q923P0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Gm43073-201ENSMUST00000198200 1189 ntBASIC18.72■□□□□ 0.59
Col20a1Q923P0 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.72■□□□□ 0.59
Col20a1Q923P0 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.72■□□□□ 0.59
Col20a1Q923P0 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Col20a1Q923P0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.72■□□□□ 0.59
Col20a1Q923P0 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Gm9727-201ENSMUST00000161387 555 ntBASIC18.71■□□□□ 0.59
Col20a1Q923P0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Gm5264-201ENSMUST00000190584 848 ntBASIC18.71■□□□□ 0.59
Col20a1Q923P0 Gm37935-201ENSMUST00000192012 982 ntBASIC18.71■□□□□ 0.59
Col20a1Q923P0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Col20a1Q923P0 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Col20a1Q923P0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Col20a1Q923P0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Gm12260-201ENSMUST00000122447 411 ntBASIC18.7■□□□□ 0.58
Col20a1Q923P0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Col20a1Q923P0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.69■□□□□ 0.58
Col20a1Q923P0 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.69■□□□□ 0.58
Col20a1Q923P0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms