Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Smc1bQ920F6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Gm14822-201ENSMUST00000122247 291 ntBASIC18.3■□□□□ 0.52
Smc1bQ920F6 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.3■□□□□ 0.52
Smc1bQ920F6 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 AC154222.1-201ENSMUST00000223882 475 ntBASIC18.3■□□□□ 0.52
Smc1bQ920F6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smc1bQ920F6 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC18.29■□□□□ 0.52
Smc1bQ920F6 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.29■□□□□ 0.52
Smc1bQ920F6 Gm15173-201ENSMUST00000122049 433 ntBASIC18.29■□□□□ 0.52
Smc1bQ920F6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Gm4535-201ENSMUST00000182274 558 ntBASIC18.29■□□□□ 0.52
Smc1bQ920F6 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Gm15590-201ENSMUST00000078419 552 ntBASIC18.29■□□□□ 0.52
Smc1bQ920F6 Gm10355-201ENSMUST00000097146 517 ntBASIC18.29■□□□□ 0.52
Smc1bQ920F6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smc1bQ920F6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Gm13418-201ENSMUST00000119097 944 ntBASIC18.28■□□□□ 0.52
Smc1bQ920F6 Gm14140-201ENSMUST00000119999 995 ntBASIC18.28■□□□□ 0.52
Smc1bQ920F6 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.28■□□□□ 0.52
Smc1bQ920F6 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.28■□□□□ 0.52
Smc1bQ920F6 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.28■□□□□ 0.52
Smc1bQ920F6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Smc1bQ920F6 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.27■□□□□ 0.52
Smc1bQ920F6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Smc1bQ920F6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms