Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Gm10355-201ENSMUST00000097146 517 ntBASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdha11Q91Y19 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Gm18195-201ENSMUST00000207604 706 ntBASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdha11Q91Y19 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Gm7862-201ENSMUST00000121461 292 ntBASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdha11Q91Y19 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Gm13418-201ENSMUST00000119097 944 ntBASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdha11Q91Y19 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdha11Q91Y19 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms