Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pcdhb1Q91Y08 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Gm25406-201ENSMUST00000157599 105 ntBASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Pcdhb1Q91Y08 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb1Q91Y08 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Pcdhb1Q91Y08 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.52■□□□□ 0.23
Pcdhb1Q91Y08 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Gm7284-201ENSMUST00000131667 944 ntBASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Gm44454-201ENSMUST00000198541 138 ntBASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Pcdhb1Q91Y08 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Gm10819-201ENSMUST00000099988 561 ntBASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Pcdhb1Q91Y08 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Pcdhb1Q91Y08 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms