Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdhb18Q91Y02 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb18Q91Y02 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb18Q91Y02 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb18Q91Y02 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb18Q91Y02 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdhb18Q91Y02 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Gm6736-201ENSMUST00000166583 948 ntBASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Gm27702-201ENSMUST00000184512 56 ntBASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdhb18Q91Y02 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Mir6404-201ENSMUST00000183699 94 ntBASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdhb18Q91Y02 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Gm9727-201ENSMUST00000161387 555 ntBASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pcdhb18Q91Y02 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms