Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Mir6404-201ENSMUST00000183699 94 ntBASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Mir8098-201ENSMUST00000184011 137 ntBASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Gm43222-201ENSMUST00000199013 603 ntBASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Gm43908-201ENSMUST00000205074 1472 ntBASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Gm7292-201ENSMUST00000194706 2527 ntBASIC15.39■□□□□ 0.05
Pcdhb20Q91XZ9 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Gm43980-201ENSMUST00000204899 1612 ntBASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb20Q91XZ9 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Gm15787-203ENSMUST00000130892 1250 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Gm25406-201ENSMUST00000157599 105 ntBASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Gm9172-201ENSMUST00000212092 954 ntBASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb20Q91XZ9 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Gm22923-201ENSMUST00000174952 110 ntBASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Gm20239-201ENSMUST00000196610 982 ntBASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Gm5864-201ENSMUST00000202263 970 ntBASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb20Q91XZ9 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms