Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb4Q91XZ6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb4Q91XZ6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Prob1-201ENSMUST00000097619 3021 ntBASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhb4Q91XZ6 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Asic1-205ENSMUST00000228185 1818 ntBASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pcdhb4Q91XZ6 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pcdhb4Q91XZ6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms