Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Pcdhb6Q91XZ4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Prob1-201ENSMUST00000097619 3021 ntBASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 AC124569.2-201ENSMUST00000225998 818 ntBASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdhb6Q91XZ4 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Pcdhb6Q91XZ4 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Gm15165-201ENSMUST00000118140 502 ntBASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Gm9172-201ENSMUST00000212092 954 ntBASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdhb6Q91XZ4 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms