Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhb8Q91XZ2 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Gm29518-201ENSMUST00000190858 372 ntBASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhb8Q91XZ2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 AA414768-201ENSMUST00000121924 1257 ntBASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb8Q91XZ2 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Gm45328-201ENSMUST00000210942 917 ntBASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb8Q91XZ2 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb8Q91XZ2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb8Q91XZ2 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms