Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhga11Q91XY8 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Gm25016-201ENSMUST00000158399 131 ntBASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Gm6345-202ENSMUST00000180900 204 ntBASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhga11Q91XY8 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Gm10052-201ENSMUST00000168019 960 ntBASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Gm44430-201ENSMUST00000203376 995 ntBASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Gm7729-201ENSMUST00000050143 801 ntBASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Prob1-201ENSMUST00000097619 3021 ntBASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhga11Q91XY8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.35■□□□□ 0.05
Pcdhga11Q91XY8 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms