Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga4Q91XY4 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Pcdhga4Q91XY4 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Pcdhga4Q91XY4 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Gm15372-201ENSMUST00000120729 834 ntBASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Pcdhga4Q91XY4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Pcdhga4Q91XY4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Gm7153-201ENSMUST00000117092 455 ntBASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Gm17971-201ENSMUST00000190239 806 ntBASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 AC114585.2-202ENSMUST00000228094 426 ntBASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Pcdhga4Q91XY4 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.63■□□□□ 0.09
Pcdhga4Q91XY4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC15.63■□□□□ 0.09
Pcdhga4Q91XY4 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Pcdhga4Q91XY4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms