Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
TraipQ8VIG6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TraipQ8VIG6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.86■□□□□ 0.29
TraipQ8VIG6 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.86■□□□□ 0.29
TraipQ8VIG6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TraipQ8VIG6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.84■□□□□ 0.29
TraipQ8VIG6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.84■□□□□ 0.29
TraipQ8VIG6 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.84■□□□□ 0.29
TraipQ8VIG6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TraipQ8VIG6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TraipQ8VIG6 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TraipQ8VIG6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.83■□□□□ 0.28
TraipQ8VIG6 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.83■□□□□ 0.28
TraipQ8VIG6 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Mir8117-201ENSMUST00000184773 107 ntBASIC16.83■□□□□ 0.28
TraipQ8VIG6 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.83■□□□□ 0.28
TraipQ8VIG6 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.83■□□□□ 0.28
TraipQ8VIG6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Gm5867-201ENSMUST00000063197 592 ntBASIC16.83■□□□□ 0.28
TraipQ8VIG6 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TraipQ8VIG6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms