Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Thap2-203ENSMUST00000218989 527 ntBASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lmcd1Q8VEE1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Lmcd1Q8VEE1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lmcd1Q8VEE1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lmcd1Q8VEE1 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lmcd1Q8VEE1 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Gm24158-201ENSMUST00000175263 71 ntBASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lmcd1Q8VEE1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lmcd1Q8VEE1 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Gm25287-201ENSMUST00000103846 110 ntBASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Gm22918-201ENSMUST00000103855 110 ntBASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Rpph1-201ENSMUST00000175096 319 ntBASIC16.86■□□□□ 0.29
Lmcd1Q8VEE1 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms