Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ndc1Q8VCB1 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ndc1Q8VCB1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Gm43514-201ENSMUST00000198852 424 ntBASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ndc1Q8VCB1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Gm2651-201ENSMUST00000203560 838 ntBASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ndc1Q8VCB1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ndc1Q8VCB1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ndc1Q8VCB1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ndc1Q8VCB1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms