Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf8Q8VC56 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.36■□□□□ 0.05
Rnf8Q8VC56 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf8Q8VC56 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf8Q8VC56 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf8Q8VC56 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf8Q8VC56 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rnf8Q8VC56 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.35■□□□□ 0.05
Rnf8Q8VC56 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rnf8Q8VC56 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf8Q8VC56 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Rnf8Q8VC56 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Rnf8Q8VC56 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Rnf8Q8VC56 Prob1-201ENSMUST00000097619 3021 ntBASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms