Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Nup35Q8R4R6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Gm3375-201ENSMUST00000203929 796 ntBASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nup35Q8R4R6 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gm14026-201ENSMUST00000120625 1789 ntBASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nup35Q8R4R6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Gm27463-201ENSMUST00000183569 57 ntBASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Nup35Q8R4R6 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms