Protein–RNA interactions for Protein: Q8R317

Ubqln1, Ubiquilin-1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln1Q8R317 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.08■□□□□ 0
Ubqln1Q8R317 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ubqln1Q8R317 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Ubqln1Q8R317 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC15.08■□□□□ 0
Ubqln1Q8R317 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Ubqln1Q8R317 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.08■□□□□ 0
Ubqln1Q8R317 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Ubqln1Q8R317 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.07■□□□□ 0
Ubqln1Q8R317 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Ubqln1Q8R317 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.07■□□□□ 0
Ubqln1Q8R317 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.07■□□□□ 0
Ubqln1Q8R317 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15.07■□□□□ 0
Ubqln1Q8R317 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Ubqln1Q8R317 Gm14859-201ENSMUST00000117752 357 ntBASIC15.07■□□□□ 0
Ubqln1Q8R317 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.07■□□□□ 0
Ubqln1Q8R317 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ubqln1Q8R317 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ubqln1Q8R317 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC15.06■□□□□ 0
Ubqln1Q8R317 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Ubqln1Q8R317 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.06■□□□□ 0
Ubqln1Q8R317 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Rprl3-201ENSMUST00000157400 290 ntBASIC15.06■□□□□ 0
Ubqln1Q8R317 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.06■□□□□ 0
Ubqln1Q8R317 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.06■□□□□ 0
Ubqln1Q8R317 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Ubqln1Q8R317 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ubqln1Q8R317 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ubqln1Q8R317 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubqln1Q8R317 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ubqln1Q8R317 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ubqln1Q8R317 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 AC153794.1-201ENSMUST00000169148 126 ntBASIC15.05■□□□□ -0
Ubqln1Q8R317 Mir6404-201ENSMUST00000183699 94 ntBASIC15.05■□□□□ -0
Ubqln1Q8R317 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.05■□□□□ -0
Ubqln1Q8R317 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Ubqln1Q8R317 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.05■□□□□ -0
Ubqln1Q8R317 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.05■□□□□ -0
Ubqln1Q8R317 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.05■□□□□ -0
Ubqln1Q8R317 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ubqln1Q8R317 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ubqln1Q8R317 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.04■□□□□ -0
Ubqln1Q8R317 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms