Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Gm9682-201ENSMUST00000197505 556 ntBASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp7Q8R1T1 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Gm17271-201ENSMUST00000165535 355 ntBASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 AC147366.1-201ENSMUST00000227671 852 ntBASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Gm15500-202ENSMUST00000071641 1019 ntBASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp7Q8R1T1 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp7Q8R1T1 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC20.27■□□□□ 0.83
Chmp7Q8R1T1 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp7Q8R1T1 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Gm18489-201ENSMUST00000172565 551 ntBASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Wnt10b-206ENSMUST00000228546 2709 ntBASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp7Q8R1T1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Chmp7Q8R1T1 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Best4-ps-201ENSMUST00000129783 1380 ntBASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Chmp7Q8R1T1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms