Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Gm27463-201ENSMUST00000183569 57 ntBASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Nudcd3Q8R1N4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nudcd3Q8R1N4 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nudcd3Q8R1N4 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Gm15039-201ENSMUST00000118914 875 ntBASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nudcd3Q8R1N4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nudcd3Q8R1N4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms