Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Zcchc9Q8R1J3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Zcchc9Q8R1J3 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.83■□□□□ 0.13
Zcchc9Q8R1J3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Zcchc9Q8R1J3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Zcchc9Q8R1J3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Zcchc9Q8R1J3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Zcchc9Q8R1J3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
Zcchc9Q8R1J3 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Psmb5-202ENSMUST00000227257 622 ntBASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Gm15590-201ENSMUST00000078419 552 ntBASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.82■□□□□ 0.12
Zcchc9Q8R1J3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Gm8097-201ENSMUST00000117903 829 ntBASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Gm15467-201ENSMUST00000120582 445 ntBASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Gm12260-201ENSMUST00000122447 411 ntBASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Zcchc9Q8R1J3 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms