Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ddx54Q8K4L0 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Gm27618-201ENSMUST00000183671 60 ntBASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Gm37519-201ENSMUST00000191687 2210 ntBASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ddx54Q8K4L0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Gm17837-201ENSMUST00000186435 985 ntBASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Gm7653-201ENSMUST00000214567 508 ntBASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 AC131710.1-201ENSMUST00000228336 990 ntBASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ddx54Q8K4L0 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Gm12017-201ENSMUST00000122453 1003 ntBASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Mir8102-201ENSMUST00000184148 139 ntBASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Gm38294-201ENSMUST00000192831 381 ntBASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ddx54Q8K4L0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ddx54Q8K4L0 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Ddx54Q8K4L0 Gm16198-201ENSMUST00000118766 670 ntBASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms