Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm7977-201ENSMUST00000193787 748 ntBASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm43183-201ENSMUST00000200632 547 ntBASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 AC158538.1-201ENSMUST00000225870 294 ntBASIC10.02□□□□□ -0.81
Cystm1Q8K353 Timm23-208ENSMUST00000226683 750 ntBASIC10.02□□□□□ -0.81
Cystm1Q8K353 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 AC115863.1-201ENSMUST00000214815 1813 ntBASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Cystm1Q8K353 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Gm12382-201ENSMUST00000122005 922 ntBASIC10.01□□□□□ -0.81
Cystm1Q8K353 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Gm29994-201ENSMUST00000195495 1193 ntBASIC10.01□□□□□ -0.81
Cystm1Q8K353 AL672049.1-201ENSMUST00000197943 91 ntBASIC10.01□□□□□ -0.81
Cystm1Q8K353 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
Cystm1Q8K353 Gm27528-202ENSMUST00000222916 2012 ntBASIC10□□□□□ -0.81
Cystm1Q8K353 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Cystm1Q8K353 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC10□□□□□ -0.81
Cystm1Q8K353 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms