Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Rtn1Q8K0T0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn1Q8K0T0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn1Q8K0T0 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn1Q8K0T0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn1Q8K0T0 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn1Q8K0T0 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Rtn1Q8K0T0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Rtn1Q8K0T0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Rtn1Q8K0T0 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Gm12644-201ENSMUST00000119935 606 ntBASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Gm9172-201ENSMUST00000212092 954 ntBASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Rtn1Q8K0T0 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Gm7506-201ENSMUST00000207758 815 ntBASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Rtn1Q8K0T0 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Rtn1Q8K0T0 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Rtn1Q8K0T0 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms