Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CroccQ8CJ40 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Gm12644-201ENSMUST00000119935 606 ntBASIC15.18■□□□□ 0.02
CroccQ8CJ40 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.18■□□□□ 0.02
CroccQ8CJ40 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CroccQ8CJ40 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.17■□□□□ 0.02
CroccQ8CJ40 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.17■□□□□ 0.02
CroccQ8CJ40 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.17■□□□□ 0.02
CroccQ8CJ40 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.17■□□□□ 0.02
CroccQ8CJ40 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Gm14859-201ENSMUST00000117752 357 ntBASIC15.17■□□□□ 0.02
CroccQ8CJ40 Gm28033-201ENSMUST00000184224 96 ntBASIC15.17■□□□□ 0.02
CroccQ8CJ40 Cmtm5-203ENSMUST00000227441 610 ntBASIC15.17■□□□□ 0.02
CroccQ8CJ40 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.17■□□□□ 0.02
CroccQ8CJ40 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CroccQ8CJ40 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CroccQ8CJ40 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CroccQ8CJ40 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CroccQ8CJ40 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CroccQ8CJ40 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CroccQ8CJ40 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CroccQ8CJ40 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms