Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfwd3Q8CIK8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Rprl3-201ENSMUST00000157400 290 ntBASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Gm18669-201ENSMUST00000216049 778 ntBASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfwd3Q8CIK8 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rfwd3Q8CIK8 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfwd3Q8CIK8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfwd3Q8CIK8 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Rfwd3Q8CIK8 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms