Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Syne4Q8CII8 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Syne4Q8CII8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Gm11745-201ENSMUST00000121669 448 ntBASIC17.93■□□□□ 0.46
Syne4Q8CII8 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Syne4Q8CII8 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Syne4Q8CII8 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Grk6-207ENSMUST00000225925 2769 ntBASIC17.92■□□□□ 0.46
Syne4Q8CII8 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Gm6257-201ENSMUST00000163864 910 ntBASIC17.92■□□□□ 0.46
Syne4Q8CII8 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Syne4Q8CII8 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.92■□□□□ 0.46
Syne4Q8CII8 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Syne4Q8CII8 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Fgf17-202ENSMUST00000227123 1336 ntBASIC17.92■□□□□ 0.46
Syne4Q8CII8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC17.92■□□□□ 0.46
Syne4Q8CII8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.91■□□□□ 0.46
Syne4Q8CII8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.91■□□□□ 0.46
Syne4Q8CII8 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Syne4Q8CII8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Mir6990-201ENSMUST00000183724 91 ntBASIC17.9■□□□□ 0.46
Syne4Q8CII8 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Syne4Q8CII8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Syne4Q8CII8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Syne4Q8CII8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Syne4Q8CII8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms