Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Gm6257-201ENSMUST00000163864 910 ntBASIC14.19□□□□□ -0.14
ShfQ8CG80 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.19□□□□□ -0.14
ShfQ8CG80 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
ShfQ8CG80 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
ShfQ8CG80 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.18□□□□□ -0.14
ShfQ8CG80 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.18□□□□□ -0.14
ShfQ8CG80 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC14.18□□□□□ -0.14
ShfQ8CG80 Gm18101-201ENSMUST00000215769 548 ntBASIC14.18□□□□□ -0.14
ShfQ8CG80 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC14.18□□□□□ -0.14
ShfQ8CG80 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC14.18□□□□□ -0.14
ShfQ8CG80 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
ShfQ8CG80 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.18□□□□□ -0.14
ShfQ8CG80 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
ShfQ8CG80 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ShfQ8CG80 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.17□□□□□ -0.14
ShfQ8CG80 Gm22697-201ENSMUST00000175194 63 ntBASIC14.17□□□□□ -0.14
ShfQ8CG80 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ShfQ8CG80 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
ShfQ8CG80 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.16□□□□□ -0.14
ShfQ8CG80 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.16□□□□□ -0.14
ShfQ8CG80 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ShfQ8CG80 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC14.16□□□□□ -0.14
ShfQ8CG80 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.16□□□□□ -0.14
ShfQ8CG80 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.16□□□□□ -0.14
ShfQ8CG80 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms