Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Smc2Q8CG48 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Smc2Q8CG48 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC18.21■□□□□ 0.51
Smc2Q8CG48 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Smc2Q8CG48 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smc2Q8CG48 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Smc2Q8CG48 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.2■□□□□ 0.5
Smc2Q8CG48 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 AA414768-201ENSMUST00000121924 1257 ntBASIC18.2■□□□□ 0.5
Smc2Q8CG48 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Gm6345-202ENSMUST00000180900 204 ntBASIC18.2■□□□□ 0.5
Smc2Q8CG48 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.2■□□□□ 0.5
Smc2Q8CG48 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smc2Q8CG48 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Smc2Q8CG48 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.19■□□□□ 0.5
Smc2Q8CG48 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Gm13836-201ENSMUST00000121159 501 ntBASIC18.19■□□□□ 0.5
Smc2Q8CG48 Gm6659-201ENSMUST00000174752 547 ntBASIC18.19■□□□□ 0.5
Smc2Q8CG48 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Gm17808-201ENSMUST00000200859 894 ntBASIC18.19■□□□□ 0.5
Smc2Q8CG48 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.19■□□□□ 0.5
Smc2Q8CG48 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.18■□□□□ 0.5
Smc2Q8CG48 Gm29518-201ENSMUST00000190858 372 ntBASIC18.18■□□□□ 0.5
Smc2Q8CG48 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smc2Q8CG48 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms