Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Gm13034-201ENSMUST00000121342 3177 ntBASIC19.67■□□□□ 0.74
Smc5Q8CG46 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Smc5Q8CG46 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Gm6257-201ENSMUST00000163864 910 ntBASIC19.66■□□□□ 0.74
Smc5Q8CG46 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Smc5Q8CG46 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Smc5Q8CG46 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Smc5Q8CG46 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc5Q8CG46 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Smc5Q8CG46 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Smc5Q8CG46 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Gm22697-201ENSMUST00000175194 63 ntBASIC19.64■□□□□ 0.73
Smc5Q8CG46 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Smc5Q8CG46 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Gm18032-201ENSMUST00000222541 538 ntBASIC19.63■□□□□ 0.73
Smc5Q8CG46 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Smc5Q8CG46 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Smc5Q8CG46 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Mir770-201ENSMUST00000103252 94 ntBASIC19.62■□□□□ 0.73
Smc5Q8CG46 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.62■□□□□ 0.73
Smc5Q8CG46 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Smc5Q8CG46 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms