Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Pcdhb7Q8CDY9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Gm36967-201ENSMUST00000193814 266 ntBASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Pcdhb7Q8CDY9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Gm6659-201ENSMUST00000174752 547 ntBASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Gm23634-201ENSMUST00000175071 91 ntBASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Pcdhb7Q8CDY9 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Gm8258-201ENSMUST00000055593 1449 ntBASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 AC158538.1-201ENSMUST00000225870 294 ntBASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhb7Q8CDY9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms