Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Fam228aQ8CDW1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Mir5122-201ENSMUST00000175004 89 ntBASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Fam228aQ8CDW1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Gm13474-201ENSMUST00000122466 815 ntBASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Fam228aQ8CDW1 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Fam228aQ8CDW1 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Fam228aQ8CDW1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.26
Fam228aQ8CDW1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
Fam228aQ8CDW1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
Fam228aQ8CDW1 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fam228aQ8CDW1 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fam228aQ8CDW1 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Fam228aQ8CDW1 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Fam228aQ8CDW1 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms