Protein–RNA interactions for Protein: Q8C6M1

Usp20, Ubiquitin carboxyl-terminal hydrolase 20, mousemouse

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp20Q8C6M1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Gm18622-201ENSMUST00000219361 595 ntBASIC17.54■□□□□ 0.4
Usp20Q8C6M1 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Usp20Q8C6M1 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Usp20Q8C6M1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Gm2213-201ENSMUST00000197485 688 ntBASIC17.52■□□□□ 0.4
Usp20Q8C6M1 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Usp20Q8C6M1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Usp20Q8C6M1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm4995-201ENSMUST00000117247 432 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm14140-201ENSMUST00000119999 995 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm8825-201ENSMUST00000182565 998 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm4518-201ENSMUST00000182638 718 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Usp20Q8C6M1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms