Protein–RNA interactions for Protein: Q8C5U0

4933409G03Rik, RIKEN cDNA 4933409G03 gene, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933409G03RikQ8C5U0 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
4933409G03RikQ8C5U0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Gm19164-201ENSMUST00000210667 640 ntBASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
4933409G03RikQ8C5U0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
4933409G03RikQ8C5U0 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
4933409G03RikQ8C5U0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
4933409G03RikQ8C5U0 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Gm13216-201ENSMUST00000117145 591 ntBASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Gm14494-201ENSMUST00000118786 435 ntBASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Gm6736-201ENSMUST00000166583 948 ntBASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
4933409G03RikQ8C5U0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.19■□□□□ 0.34
4933409G03RikQ8C5U0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Gm5682-201ENSMUST00000173402 505 ntBASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
4933409G03RikQ8C5U0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms