Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp44Q8C2S0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.58■□□□□ 0.57
Usp44Q8C2S0 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.58■□□□□ 0.57
Usp44Q8C2S0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp44Q8C2S0 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp44Q8C2S0 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp44Q8C2S0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Gm27459-201ENSMUST00000184860 107 ntBASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Gm8655-201ENSMUST00000221159 852 ntBASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Usp44Q8C2S0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp44Q8C2S0 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Gm5837-201ENSMUST00000191844 1369 ntBASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp44Q8C2S0 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Usp44Q8C2S0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Usp44Q8C2S0 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms