Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Sybu-209ENSMUST00000228639 4113 ntBASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tsen54Q8C2A2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tsen54Q8C2A2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tsen54Q8C2A2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tsen54Q8C2A2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Odf3b-204ENSMUST00000227834 930 ntBASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tsen54Q8C2A2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Gm37055-201ENSMUST00000191866 133 ntBASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tsen54Q8C2A2 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Tsen54Q8C2A2 Mir6982-201ENSMUST00000184354 68 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms