Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Gm43799-201ENSMUST00000201845 579 ntBASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Smim4Q8C1Q6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smim4Q8C1Q6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Smim4Q8C1Q6 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smim4Q8C1Q6 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smim4Q8C1Q6 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Smim4Q8C1Q6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Gm18101-201ENSMUST00000215769 548 ntBASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Gm21559-201ENSMUST00000220638 855 ntBASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Gm8587-201ENSMUST00000076538 843 ntBASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Smim4Q8C1Q6 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Sybu-209ENSMUST00000228639 4113 ntBASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Gm11355-201ENSMUST00000121120 306 ntBASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Gm22697-201ENSMUST00000175194 63 ntBASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Gm37722-201ENSMUST00000193757 208 ntBASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Smim4Q8C1Q6 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Smim4Q8C1Q6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms