Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek11Q8C0Q4 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek11Q8C0Q4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Nek11Q8C0Q4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Nek11Q8C0Q4 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
Nek11Q8C0Q4 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.83■□□□□ 0.61
Nek11Q8C0Q4 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC18.83■□□□□ 0.61
Nek11Q8C0Q4 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nek11Q8C0Q4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nek11Q8C0Q4 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Nek11Q8C0Q4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Nek11Q8C0Q4 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Birc2-201ENSMUST00000054878 378 ntBASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Nek11Q8C0Q4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Gm17971-201ENSMUST00000190239 806 ntBASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Nek11Q8C0Q4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.8■□□□□ 0.6
Nek11Q8C0Q4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Nek11Q8C0Q4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms