Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rd3Q8BRE0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rd3Q8BRE0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rd3Q8BRE0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Gm24513-201ENSMUST00000174964 138 ntBASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rd3Q8BRE0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Gm2756-201ENSMUST00000195851 400 ntBASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.82■□□□□ 0.28
Rd3Q8BRE0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rd3Q8BRE0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Gm5682-201ENSMUST00000173402 505 ntBASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Gm45683-201ENSMUST00000210825 1247 ntBASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.8■□□□□ 0.28
Rd3Q8BRE0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Grk6-207ENSMUST00000225925 2769 ntBASIC16.79■□□□□ 0.28
Rd3Q8BRE0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms